Variant Calling

SNPs and variant calling

DnA lab short read sequencing workshop

Methods in genomic variant calling

European Bioinformatics Institute - EMBL-EBI

WGS Variant Calling: Variant calling with GATK - Part 1 | Detailed NGS Analysis Workflow

Bioinformagician

NGS - Genome Variant analysis – Variant calling (3 of 5)

SIB - Swiss Institute of Bioinformatics

MPG Primer: Sequence variant calling and data handling (2018)

Broad Institute

Variant Calling with Bioconductor

Kishwar Shafin - Accurate variant calling and de novo assembly with nanopore reads

Oxford Nanopore Technologies

Is the 38mm Hamilton Murph TOO SMALL?!

MPG Primer: High throughput sequencing and variant calling pipelines (2017)

Broad Institute

W8: Variant Calling with GATK - Day 1

UCLA QCBio Collaboratory

Variant Call Format | Common Conventions

3. Introduction to Variant Discovery

Chipster Tutorials

Best-practice variant calling pipeline for automated sequencing analysis; SciPy 2013 Presentation

WES, sequence alignment, variant calling and annotation review, part 1

Michael Gonzalez

Variant calling tutorial

BroadE: Introduction to data processing and variant detection for next-generation DNA sequencing

Broad Institute

Next-Generation Variant Calling Workflow Part 1

Presentation - Intro to Genome Analysis (Christina Austin-Tse)

ClinGen Resource

variant calling with freebayes tutorial on single samples

Bioinformatics for Beginners